Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 AC051619.9-201ENST00000623237 597 ntBASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC23.06■■□□□ 1.28
ARHGEF40Q8TER5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 AC097065.1-201ENST00000425737 517 ntBASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 DNAJB1P1-201ENST00000429417 1024 ntBASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 AC073150.1-201ENST00000450406 1084 ntBASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
ARHGEF40Q8TER5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 AC004899.1-201ENST00000424687 1714 ntBASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 MIR1227-201ENST00000408484 88 ntBASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 AC025271.4-201ENST00000621477 1726 ntBASIC23.04■■□□□ 1.28
ARHGEF40Q8TER5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC138894.2-201ENST00000602838 371 ntBASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC087045.2-201ENST00000606279 1003 ntBASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC092171.5-201ENST00000608012 942 ntBASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC007881.3-201ENST00000608897 607 ntBASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 RPL18P13-201ENST00000478088 569 ntBASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 IRF3-215ENST00000596822 823 ntTSL 3 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC23.03■■□□□ 1.28
ARHGEF40Q8TER5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
ARHGEF40Q8TER5 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms