Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AL353779.1-201ENST00000434793 351 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC004233.3-201ENST00000607794 1269 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC093525.8-201ENST00000624099 1342 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC092850.2-201ENST00000623821 2697 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 CICP13-201ENST00000422015 2789 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 AC084364.1-201ENST00000551967 1556 ntBASIC15.97■□□□□ 0.15
CHD5Q8TDI0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD5Q8TDI0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 PPT1-215ENST00000641471 2368 ntBASIC15.96■□□□□ 0.15
CHD5Q8TDI0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 AC124283.3-201ENST00000570869 594 ntBASIC15.96■□□□□ 0.15
CHD5Q8TDI0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD5Q8TDI0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.96■□□□□ 0.14
CHD5Q8TDI0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHD5Q8TDI0 AC127383.1-201ENST00000444697 1800 ntBASIC15.96■□□□□ 0.14
CHD5Q8TDI0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CHD5Q8TDI0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.96■□□□□ 0.14
CHD5Q8TDI0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHD5Q8TDI0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AL442647.2-201ENST00000429864 857 ntBASIC15.95■□□□□ 0.14
CHD5Q8TDI0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 TP53TG3HP-202ENST00000569755 579 ntBASIC15.95■□□□□ 0.14
CHD5Q8TDI0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 DRD5P1-201ENST00000456605 1438 ntBASIC15.95■□□□□ 0.14
CHD5Q8TDI0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 USP32P1-208ENST00000506594 1164 ntBASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.95■□□□□ 0.14
CHD5Q8TDI0 AC123567.1-201ENST00000548294 1261 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms