Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 AC073347.1-201ENST00000421633 2643 ntBASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 AC109322.1-201ENST00000524499 1264 ntBASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 AC003101.2-201ENST00000612557 442 ntBASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 LINC00628-201ENST00000628516 1289 ntBASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 AC136621.1-201ENST00000624017 2304 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 LINC00554-201ENST00000564841 3011 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 PPT1-215ENST00000641471 2368 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AC126177.1-201ENST00000547829 2218 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AC013268.4-201ENST00000637413 2228 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 PHKG1P2-201ENST00000457537 863 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 HLA-J-203ENST00000494367 1087 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AL450472.2-201ENST00000603663 1156 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AL133215.2-201ENST00000609242 977 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AP001059.3-201ENST00000619053 235 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 AC105250.1-201ENST00000509378 2057 ntBASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDH19Q8TAB3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms