Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 MIR940-201ENST00000401276 94 ntBASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 FAM58CP-201ENST00000435741 640 ntBASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 MIR4321-201ENST00000592276 80 ntBASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 AL671883.3-201ENST00000603274 991 ntBASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF439Q8NDP4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 FOXO1B-201ENST00000504678 1527 ntBASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 HAUS4P1-201ENST00000406739 1145 ntBASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AC004832.2-201ENST00000426397 482 ntBASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AL671277.1-201ENST00000429656 993 ntBASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AL135744.1-201ENST00000565098 629 ntBASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
ZNF439Q8NDP4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 AC132872.4-202ENST00000622924 2756 ntBASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.3□□□□□ -0.28
ZNF439Q8NDP4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms