Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 REXO1L6P-202ENST00000619970 1078 ntBASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AL009178.2-201ENST00000597278 2719 ntBASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 AKR1C7P-201ENST00000305623 895 ntBASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SAPCD2P3-201ENST00000455031 850 ntBASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM42Q8IWZ5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AC105250.1-201ENST00000509378 2057 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms