Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 AC020765.3-201ENST00000613051 740 ntBASIC15.36■□□□□ 0.05
RAB43Q86YS6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 FOXO1B-201ENST00000504678 1527 ntBASIC15.36■□□□□ 0.05
RAB43Q86YS6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB43Q86YS6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.36■□□□□ 0.05
RAB43Q86YS6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AL671710.1-201ENST00000610245 2349 ntBASIC15.35■□□□□ 0.05
RAB43Q86YS6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AC022144.1-201ENST00000602255 1580 ntBASIC15.35■□□□□ 0.05
RAB43Q86YS6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB43Q86YS6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
RAB43Q86YS6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 MIR661-201ENST00000384842 89 ntBASIC15.34■□□□□ 0.05
RAB43Q86YS6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 AL589739.1-201ENST00000607720 493 ntBASIC15.34■□□□□ 0.05
RAB43Q86YS6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB43Q86YS6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB43Q86YS6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms