Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 LINC01238-205ENST00000567549 1107 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 RNF126P1-202ENST00000569893 925 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 TMEM191A-211ENST00000637163 1067 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 BEND3P1-201ENST00000421591 1944 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AC243591.1-201ENST00000452967 1364 ntBASIC13.36□□□□□ -0.27
ZNF546Q86UE3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AC112907.2-201ENST00000448639 330 ntBASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 TERC-201ENST00000602385 541 ntBASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AL590326.2-201ENST00000625139 305 ntBASIC13.36□□□□□ -0.27
ZNF546Q86UE3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 AL359183.1-201ENST00000623796 2132 ntBASIC13.36□□□□□ -0.27
ZNF546Q86UE3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF546Q86UE3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms