Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 PCDHB19P-201ENST00000570871 2371 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 U91328.1-201ENST00000437528 223 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC104596.2-201ENST00000512793 793 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC092552.1-201ENST00000547243 906 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC036164.1-201ENST00000570544 333 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC011495.1-201ENST00000498085 584 ntBASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC124067.4-201ENST00000519691 2379 ntBASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AC099398.1-201ENST00000567919 2776 ntBASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE3BQ7Z3V4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms