Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 AC023310.1-201ENST00000554836 735 ntBASIC13.06□□□□□ -0.32
VPS13CQ709C8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 AC015818.8-201ENST00000587907 1519 ntBASIC13.06□□□□□ -0.32
VPS13CQ709C8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13CQ709C8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13CQ709C8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 AC134698.3-201ENST00000523880 214 ntBASIC13.05□□□□□ -0.32
VPS13CQ709C8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.05□□□□□ -0.32
VPS13CQ709C8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13CQ709C8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VPS13CQ709C8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 AC245100.5-201ENST00000452108 331 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 U62317.3-201ENST00000608319 855 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 CYP46A4P-201ENST00000414953 267 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13CQ709C8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 YRDCP1-201ENST00000621419 643 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13CQ709C8 ME2P1-201ENST00000426028 1970 ntBASIC13.04□□□□□ -0.32
VPS13CQ709C8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms