Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AC024267.1-201ENST00000582320 895 ntBASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 AL691432.1-201ENST00000596308 1422 ntBASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 TNRC18P2-201ENST00000417666 2714 ntBASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 AC055717.3-201ENST00000622967 595 ntBASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 AC073347.1-201ENST00000421633 2643 ntBASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.41□□□□□ -0.1
NHLRC1Q6VVB1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AL627223.1-201ENST00000416693 442 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 IGHV3-62-201ENST00000520057 340 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms