Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL54Q6P161 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 AC092127.1-201ENST00000567093 3455 ntBASIC12.15□□□□□ -0.46
MRPL54Q6P161 AL592424.1-201ENST00000563624 1536 ntBASIC12.15□□□□□ -0.46
MRPL54Q6P161 AC105250.1-201ENST00000509378 2057 ntBASIC12.15□□□□□ -0.46
MRPL54Q6P161 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
MRPL54Q6P161 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL54Q6P161 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL54Q6P161 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
MRPL54Q6P161 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.15□□□□□ -0.47
MRPL54Q6P161 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.15□□□□□ -0.47
MRPL54Q6P161 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MRPL54Q6P161 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.15□□□□□ -0.47
MRPL54Q6P161 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.15□□□□□ -0.47
MRPL54Q6P161 Z83836.1-201ENST00000624605 1642 ntBASIC12.15□□□□□ -0.47
MRPL54Q6P161 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
MRPL54Q6P161 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 MROH4P-201ENST00000431302 1578 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 AC005336.2-201ENST00000593183 939 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 AC140113.3-201ENST00000605663 199 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 AD001527.2-201ENST00000622994 785 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 AC148477.5-201ENST00000625164 1645 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 CYP2D8P-201ENST00000433633 1490 ntBASIC12.14□□□□□ -0.47
MRPL54Q6P161 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.14□□□□□ -0.47
MRPL54Q6P161 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MRPL54Q6P161 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms