Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AC022144.1-201ENST00000602255 1580 ntBASIC16.43■□□□□ 0.22
ALFQ53S48 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 MIR661-201ENST00000384842 89 ntBASIC16.42■□□□□ 0.22
ALFQ53S48 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.42■□□□□ 0.22
ALFQ53S48 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.42■□□□□ 0.22
ALFQ53S48 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.42■□□□□ 0.22
ALFQ53S48 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.42■□□□□ 0.22
ALFQ53S48 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 MIR6069-201ENST00000620069 79 ntBASIC16.42■□□□□ 0.22
ALFQ53S48 AJ011932.1-201ENST00000621707 465 ntBASIC16.42■□□□□ 0.22
ALFQ53S48 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.42■□□□□ 0.22
ALFQ53S48 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.42■□□□□ 0.22
ALFQ53S48 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.42■□□□□ 0.22
ALFQ53S48 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ALFQ53S48 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.41■□□□□ 0.22
ALFQ53S48 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.41■□□□□ 0.22
ALFQ53S48 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.41■□□□□ 0.22
ALFQ53S48 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.41■□□□□ 0.22
ALFQ53S48 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.41■□□□□ 0.22
ALFQ53S48 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.41■□□□□ 0.22
ALFQ53S48 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.41■□□□□ 0.22
ALFQ53S48 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ALFQ53S48 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.41■□□□□ 0.22
ALFQ53S48 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.41■□□□□ 0.22
ALFQ53S48 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.41■□□□□ 0.22
ALFQ53S48 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.41■□□□□ 0.22
ALFQ53S48 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.41■□□□□ 0.22
ALFQ53S48 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALFQ53S48 TNRC18P3-201ENST00000441896 2691 ntBASIC16.41■□□□□ 0.22
ALFQ53S48 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.4■□□□□ 0.22
ALFQ53S48 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.4■□□□□ 0.22
ALFQ53S48 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ALFQ53S48 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ALFQ53S48 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ALFQ53S48 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.4■□□□□ 0.22
ALFQ53S48 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ALFQ53S48 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.4■□□□□ 0.22
ALFQ53S48 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.4■□□□□ 0.22
ALFQ53S48 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 PHKG1P2-201ENST00000457537 863 ntBASIC16.4■□□□□ 0.22
ALFQ53S48 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.4■□□□□ 0.22
ALFQ53S48 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.4■□□□□ 0.22
ALFQ53S48 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALFQ53S48 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.4■□□□□ 0.22
ALFQ53S48 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.4■□□□□ 0.22
ALFQ53S48 AC025048.3-201ENST00000590609 569 ntBASIC16.4■□□□□ 0.22
ALFQ53S48 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms