Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AC023141.5-201ENST00000458585 616 ntBASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 IGHV3-62-201ENST00000520057 340 ntBASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AC009093.7-201ENST00000623853 1223 ntBASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC023157.3-201ENST00000619086 2088 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 KRT18P32-201ENST00000424695 1287 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC105233.2-201ENST00000523697 349 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AF228730.5-201ENST00000530288 346 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 KRT8P23-201ENST00000560090 1207 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 AC005622.1-201ENST00000636801 1703 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
KHDC1Q4VXA5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KHDC1Q4VXA5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms