Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DCAF4L1Q3SXM0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DCAF4L1Q3SXM0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.23■□□□□ 0.35
DCAF4L1Q3SXM0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
DCAF4L1Q3SXM0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AC124067.4-201ENST00000519691 2379 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 CDC14C-201ENST00000428251 1719 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AC098614.1-201ENST00000368528 745 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 TOMM22P5-201ENST00000416399 439 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AC036164.1-201ENST00000570544 333 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AC008494.3-201ENST00000606615 944 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AL391069.4-201ENST00000609583 481 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCAF4L1Q3SXM0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 LINC02447-202ENST00000501888 2146 ntBASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 AC123567.1-201ENST00000548294 1261 ntBASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCAF4L1Q3SXM0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 AC018892.3-201ENST00000623986 2499 ntBASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCAF4L1Q3SXM0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms