Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC254562.1-201ENST00000417586 456 ntBASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 SNHG9-202ENST00000564014 471 ntBASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC013467.2-201ENST00000605472 835 ntBASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC055717.3-201ENST00000622967 595 ntBASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 PPT1-215ENST00000641471 2368 ntBASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF3Q3KNV8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SLC22A20-204ENST00000530038 1673 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 RN7SL589P-201ENST00000481268 310 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 CYP2A7P1-201ENST00000595391 815 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AL009183.1-201ENST00000603760 355 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AL031055.1-201ENST00000606362 631 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AC092902.6-201ENST00000641783 218 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms