Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 TPRX2P-201ENST00000535362 881 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC023310.3-201ENST00000557027 670 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC005225.4-201ENST00000557330 545 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC100756.1-201ENST00000562736 682 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC138749.3-201ENST00000567691 622 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 TP53TG3HP-202ENST00000569755 579 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC027307.3-201ENST00000594262 1100 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 LINC01115-203ENST00000606068 577 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 AC116165.1-201ENST00000611806 668 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 AC140912.1-201ENST00000577171 1054 ntBASIC19.56■□□□□ 0.72
ATP2B3Q16720 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 SLC7A15P-201ENST00000424028 1363 ntBASIC19.56■□□□□ 0.72
ATP2B3Q16720 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B3Q16720 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B3Q16720 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 AC074338.1-201ENST00000416825 156 ntBASIC19.55■□□□□ 0.72
ATP2B3Q16720 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 TARDBPP1-201ENST00000442013 1203 ntBASIC19.55■□□□□ 0.72
ATP2B3Q16720 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B3Q16720 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 CHCHD2P3-201ENST00000603038 451 ntBASIC19.55■□□□□ 0.72
ATP2B3Q16720 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B3Q16720 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms