Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.85□□□□□ -0.03
HOXC5Q00444 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.85□□□□□ -0.03
HOXC5Q00444 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.85□□□□□ -0.03
HOXC5Q00444 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.85□□□□□ -0.03
HOXC5Q00444 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.85□□□□□ -0.03
HOXC5Q00444 RARRES2P8-201ENST00000566335 367 ntBASIC14.85□□□□□ -0.03
HOXC5Q00444 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.85□□□□□ -0.03
HOXC5Q00444 AL365330.1-201ENST00000607459 531 ntBASIC14.85□□□□□ -0.03
HOXC5Q00444 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 FOXO1B-201ENST00000504678 1527 ntBASIC14.84□□□□□ -0.03
HOXC5Q00444 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.84□□□□□ -0.03
HOXC5Q00444 GPX1P2-201ENST00000429271 606 ntBASIC14.84□□□□□ -0.03
HOXC5Q00444 AL671277.1-201ENST00000429656 993 ntBASIC14.84□□□□□ -0.03
HOXC5Q00444 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 FAM58CP-201ENST00000435741 640 ntBASIC14.84□□□□□ -0.03
HOXC5Q00444 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 MIR4321-201ENST00000592276 80 ntBASIC14.84□□□□□ -0.03
HOXC5Q00444 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HOXC5Q00444 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HOXC5Q00444 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.84□□□□□ -0.03
HOXC5Q00444 AC136621.1-201ENST00000624017 2304 ntBASIC14.83□□□□□ -0.03
HOXC5Q00444 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HOXC5Q00444 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.83□□□□□ -0.03
HOXC5Q00444 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.03
HOXC5Q00444 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC5Q00444 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HOXC5Q00444 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 AL009178.2-201ENST00000597278 2719 ntBASIC14.83□□□□□ -0.04
HOXC5Q00444 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC5Q00444 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC5Q00444 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC5Q00444 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC5Q00444 POLD2P1-201ENST00000511220 997 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms