Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB1P98172 IGHV3-22-201ENST00000520721 359 ntBASIC14.28□□□□□ -0.12
EFNB1P98172 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.28□□□□□ -0.12
EFNB1P98172 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB1P98172 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB1P98172 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB1P98172 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EFNB1P98172 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.28□□□□□ -0.12
EFNB1P98172 AC025580.3-201ENST00000617932 1424 ntBASIC14.28□□□□□ -0.12
EFNB1P98172 AL161645.1-201ENST00000622716 1255 ntBASIC14.28□□□□□ -0.12
EFNB1P98172 AC116407.3-201ENST00000623905 1129 ntBASIC14.28□□□□□ -0.12
EFNB1P98172 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
EFNB1P98172 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
EFNB1P98172 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB1P98172 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EFNB1P98172 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB1P98172 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.27□□□□□ -0.12
EFNB1P98172 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 AL136982.4-201ENST00000437689 1740 ntBASIC14.27□□□□□ -0.12
EFNB1P98172 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
EFNB1P98172 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.27□□□□□ -0.12
EFNB1P98172 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
EFNB1P98172 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB1P98172 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB1P98172 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.27□□□□□ -0.13
EFNB1P98172 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EFNB1P98172 AC097359.3-201ENST00000603982 1210 ntBASIC14.27□□□□□ -0.13
EFNB1P98172 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.27□□□□□ -0.13
EFNB1P98172 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB1P98172 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
EFNB1P98172 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
EFNB1P98172 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
EFNB1P98172 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB1P98172 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB1P98172 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB1P98172 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
EFNB1P98172 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 PHKG1P2-201ENST00000457537 863 ntBASIC14.26□□□□□ -0.13
EFNB1P98172 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 RNA5SP419-201ENST00000515908 135 ntBASIC14.26□□□□□ -0.13
EFNB1P98172 RNA5SP415-201ENST00000517246 115 ntBASIC14.26□□□□□ -0.13
EFNB1P98172 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms