Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 KRT8P49-201ENST00000604166 1432 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC211486.1-202ENST00000416371 468 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 HTR5BP-201ENST00000430851 1154 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC211476.1-201ENST00000503899 468 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.09□□□□□ -0.15
SEC61A1P61619 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.09□□□□□ -0.15
SEC61A1P61619 REXO1L3P-201ENST00000622202 1288 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 C20orf181-201ENST00000623918 480 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC026748.1-201ENST00000624349 3251 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61A1P61619 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 AC023908.3-201ENST00000564211 3047 ntBASIC14.09□□□□□ -0.15
SEC61A1P61619 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SEC61A1P61619 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61A1P61619 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.08□□□□□ -0.15
SEC61A1P61619 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.08□□□□□ -0.15
SEC61A1P61619 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SEC61A1P61619 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
SEC61A1P61619 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 FAM58CP-201ENST00000435741 640 ntBASIC14.08□□□□□ -0.16
SEC61A1P61619 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.08□□□□□ -0.16
SEC61A1P61619 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
SEC61A1P61619 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 DUX4L17-201ENST00000557360 1267 ntBASIC14.08□□□□□ -0.16
SEC61A1P61619 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
SEC61A1P61619 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 AC068137.2-201ENST00000605408 478 ntBASIC14.08□□□□□ -0.16
SEC61A1P61619 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 AC091812.2-201ENST00000619081 385 ntBASIC14.08□□□□□ -0.16
SEC61A1P61619 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms