Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 RPS15P9-201ENST00000494093 319 ntBASIC14.69□□□□□ -0.06
CDC42P60953 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 SART3-203ENST00000546611 1184 ntBASIC14.69□□□□□ -0.06
CDC42P60953 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.69□□□□□ -0.06
CDC42P60953 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.69□□□□□ -0.06
CDC42P60953 AC091076.1-201ENST00000610741 619 ntBASIC14.69□□□□□ -0.06
CDC42P60953 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CDC42P60953 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 AL355877.3-201ENST00000622820 899 ntBASIC14.69□□□□□ -0.06
CDC42P60953 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42P60953 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDC42P60953 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDC42P60953 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42P60953 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42P60953 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDC42P60953 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDC42P60953 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 LAGE3P1-201ENST00000425356 484 ntBASIC14.68□□□□□ -0.06
CDC42P60953 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 SCARNA2-201ENST00000458748 420 ntBASIC14.68□□□□□ -0.06
CDC42P60953 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 NPAP1P7-201ENST00000613027 823 ntBASIC14.68□□□□□ -0.06
CDC42P60953 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 AP001282.1-201ENST00000531301 1499 ntBASIC14.68□□□□□ -0.06
CDC42P60953 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 AC092127.1-201ENST00000567093 3455 ntBASIC14.68□□□□□ -0.06
CDC42P60953 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42P60953 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42P60953 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42P60953 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 C18orf15-201ENST00000623680 2534 ntBASIC14.67□□□□□ -0.06
CDC42P60953 AC112693.3-201ENST00000624819 1983 ntBASIC14.67□□□□□ -0.06
CDC42P60953 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms