Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
EFNA3P52797 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EFNA3P52797 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.95□□□□□ -0.02
EFNA3P52797 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EFNA3P52797 AP001282.1-201ENST00000531301 1499 ntBASIC14.95□□□□□ -0.02
EFNA3P52797 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
EFNA3P52797 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 SPDYE19P-201ENST00000338590 713 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 TARDBPP1-201ENST00000442013 1203 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
EFNA3P52797 HNRNPUP1-201ENST00000554987 333 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 AC023310.3-201ENST00000557027 670 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 AC100756.1-201ENST00000562736 682 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 AC138749.3-201ENST00000567691 622 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 AC116165.1-201ENST00000611806 668 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.94□□□□□ -0.02
EFNA3P52797 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 Z97205.2-201ENST00000564697 1639 ntBASIC14.94□□□□□ -0.02
EFNA3P52797 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EFNA3P52797 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.94□□□□□ -0.02
EFNA3P52797 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
EFNA3P52797 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
EFNA3P52797 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 AC069224.1-201ENST00000566372 1715 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
EFNA3P52797 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 MIR648-201ENST00000385046 94 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
EFNA3P52797 PIN1P1-201ENST00000412108 996 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 KRT18P64-201ENST00000434946 1219 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 DOC2GP-202ENST00000514950 1163 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.93□□□□□ -0.02
EFNA3P52797 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 CHCHD2P3-201ENST00000603038 451 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 AC097359.3-201ENST00000603982 1210 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 AC074044.1-201ENST00000609673 707 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 AL662799.1-202ENST00000614205 422 ntBASIC14.93□□□□□ -0.02
EFNA3P52797 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EFNA3P52797 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
EFNA3P52797 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.93□□□□□ -0.02
EFNA3P52797 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.93□□□□□ -0.02
EFNA3P52797 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.92□□□□□ -0.02
EFNA3P52797 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
EFNA3P52797 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.92□□□□□ -0.02
EFNA3P52797 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
EFNA3P52797 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EFNA3P52797 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms