Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.01■□□□□ 0.47
USP11P51784 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
USP11P51784 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 AP005117.1-202ENST00000581724 1908 ntBASIC18■□□□□ 0.47
USP11P51784 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18■□□□□ 0.47
USP11P51784 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
USP11P51784 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18■□□□□ 0.47
USP11P51784 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18■□□□□ 0.47
USP11P51784 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18■□□□□ 0.47
USP11P51784 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18■□□□□ 0.47
USP11P51784 MIR4745-201ENST00000577608 62 ntBASIC18■□□□□ 0.47
USP11P51784 RN7SL204P-201ENST00000582831 262 ntBASIC18■□□□□ 0.47
USP11P51784 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
USP11P51784 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 AC092364.2-202ENST00000597012 1073 ntBASIC18■□□□□ 0.47
USP11P51784 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18■□□□□ 0.47
USP11P51784 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18■□□□□ 0.47
USP11P51784 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
USP11P51784 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18■□□□□ 0.47
USP11P51784 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP11P51784 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
USP11P51784 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.99■□□□□ 0.47
USP11P51784 MIR661-201ENST00000384842 89 ntBASIC17.99■□□□□ 0.47
USP11P51784 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 LINC02560-201ENST00000596379 459 ntBASIC17.99■□□□□ 0.47
USP11P51784 SRD5A3P1-201ENST00000603021 949 ntBASIC17.99■□□□□ 0.47
USP11P51784 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 AC022188.1-201ENST00000620960 1664 ntBASIC17.99■□□□□ 0.47
USP11P51784 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP11P51784 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.99■□□□□ 0.47
USP11P51784 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
USP11P51784 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 SPTLC1P1-201ENST00000447199 261 ntBASIC17.98■□□□□ 0.47
USP11P51784 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.98■□□□□ 0.47
USP11P51784 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms