Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 AP003071.4-201ENST00000562276 1284 ntBASIC12.93□□□□□ -0.34
RAB5CP51148 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB5CP51148 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 AL356585.2-201ENST00000625078 2396 ntBASIC12.93□□□□□ -0.34
RAB5CP51148 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB5CP51148 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB5CP51148 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB5CP51148 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5CP51148 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB5CP51148 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5CP51148 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB5CP51148 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 HAUS4P1-201ENST00000406739 1145 ntBASIC12.92□□□□□ -0.34
RAB5CP51148 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 AC012618.2-201ENST00000428058 849 ntBASIC12.92□□□□□ -0.34
RAB5CP51148 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5CP51148 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5CP51148 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB5CP51148 AC005622.1-201ENST00000636801 1703 ntBASIC12.92□□□□□ -0.34
RAB5CP51148 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5CP51148 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 REXO1L1P-202ENST00000608646 1974 ntBASIC12.92□□□□□ -0.34
RAB5CP51148 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 CICP8-201ENST00000455800 2813 ntBASIC12.92□□□□□ -0.34
RAB5CP51148 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5CP51148 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
RAB5CP51148 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5CP51148 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAB5CP51148 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5CP51148 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5CP51148 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5CP51148 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB5CP51148 AC092127.1-201ENST00000567093 3455 ntBASIC12.91□□□□□ -0.34
RAB5CP51148 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
RAB5CP51148 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5CP51148 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5CP51148 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms