Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SRP9P49458 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.28□□□□□ -0.12
SRP9P49458 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.28□□□□□ -0.12
SRP9P49458 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SRP9P49458 AC040169.1-201ENST00000565382 521 ntBASIC14.28□□□□□ -0.12
SRP9P49458 AC013467.2-201ENST00000605472 835 ntBASIC14.28□□□□□ -0.12
SRP9P49458 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.28□□□□□ -0.12
SRP9P49458 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.28□□□□□ -0.12
SRP9P49458 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SRP9P49458 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SRP9P49458 AL359258.3-201ENST00000622910 2331 ntBASIC14.27□□□□□ -0.12
SRP9P49458 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SRP9P49458 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SRP9P49458 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRP9P49458 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SRP9P49458 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRP9P49458 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRP9P49458 AC016027.1-202ENST00000607927 1699 ntBASIC14.27□□□□□ -0.12
SRP9P49458 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRP9P49458 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRP9P49458 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.27□□□□□ -0.12
SRP9P49458 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SRP9P49458 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SRP9P49458 POLD2P1-201ENST00000511220 997 ntBASIC14.27□□□□□ -0.13
SRP9P49458 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SRP9P49458 AC018845.2-201ENST00000568326 409 ntBASIC14.27□□□□□ -0.13
SRP9P49458 AC004877.2-201ENST00000623941 599 ntBASIC14.27□□□□□ -0.13
SRP9P49458 AL139011.1-202ENST00000642063 584 ntBASIC14.27□□□□□ -0.13
SRP9P49458 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.27□□□□□ -0.13
SRP9P49458 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.27□□□□□ -0.13
SRP9P49458 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.27□□□□□ -0.13
SRP9P49458 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SRP9P49458 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.27□□□□□ -0.13
SRP9P49458 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRP9P49458 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SRP9P49458 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.26□□□□□ -0.13
SRP9P49458 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SRP9P49458 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 AL109954.1-202ENST00000564051 2148 ntBASIC14.26□□□□□ -0.13
SRP9P49458 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.26□□□□□ -0.13
SRP9P49458 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.26□□□□□ -0.13
SRP9P49458 KRT18P2-201ENST00000447938 1258 ntBASIC14.26□□□□□ -0.13
SRP9P49458 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.26□□□□□ -0.13
SRP9P49458 AC002347.1-201ENST00000569543 541 ntBASIC14.26□□□□□ -0.13
SRP9P49458 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.26□□□□□ -0.13
SRP9P49458 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.26□□□□□ -0.13
SRP9P49458 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SRP9P49458 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms