Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC000095.1-201ENST00000603208 874 ntBASIC17.69■□□□□ 0.42
CENPFP49454 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPFP49454 AL359258.3-201ENST00000622910 2331 ntBASIC17.69■□□□□ 0.42
CENPFP49454 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CENPFP49454 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 AC008132.1-202ENST00000342005 1389 ntBASIC17.68■□□□□ 0.42
CENPFP49454 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.68■□□□□ 0.42
CENPFP49454 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 AC141586.1-203ENST00000567242 366 ntBASIC17.68■□□□□ 0.42
CENPFP49454 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 AC005730.2-201ENST00000564549 1184 ntBASIC17.68■□□□□ 0.42
CENPFP49454 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.68■□□□□ 0.42
CENPFP49454 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.68■□□□□ 0.42
CENPFP49454 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 AC004899.1-201ENST00000424687 1714 ntBASIC17.68■□□□□ 0.42
CENPFP49454 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.68■□□□□ 0.42
CENPFP49454 MIR3147-201ENST00000577811 66 ntBASIC17.68■□□□□ 0.42
CENPFP49454 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPFP49454 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CENPFP49454 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPFP49454 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.67■□□□□ 0.42
CENPFP49454 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.67■□□□□ 0.42
CENPFP49454 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.67■□□□□ 0.42
CENPFP49454 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.67■□□□□ 0.42
CENPFP49454 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.67■□□□□ 0.42
CENPFP49454 AL136301.1-201ENST00000615830 422 ntBASIC17.67■□□□□ 0.42
CENPFP49454 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.67■□□□□ 0.42
CENPFP49454 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
CENPFP49454 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CENPFP49454 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.67■□□□□ 0.42
CENPFP49454 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.67■□□□□ 0.42
CENPFP49454 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CENPFP49454 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.67■□□□□ 0.42
CENPFP49454 AL353726.2-201ENST00000623259 884 ntBASIC17.67■□□□□ 0.42
CENPFP49454 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CENPFP49454 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.67■□□□□ 0.42
CENPFP49454 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.67■□□□□ 0.42
CENPFP49454 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPFP49454 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPFP49454 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPFP49454 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.66■□□□□ 0.42
CENPFP49454 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPFP49454 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CENPFP49454 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CENPFP49454 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPFP49454 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPFP49454 RN7SL774P-201ENST00000577467 290 ntBASIC17.66■□□□□ 0.42
CENPFP49454 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.66■□□□□ 0.42
CENPFP49454 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPFP49454 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms