Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GRIK1P39086 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
GRIK1P39086 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GRIK1P39086 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.84■□□□□ 0.29
GRIK1P39086 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GRIK1P39086 AC006449.5-201ENST00000610658 2098 ntBASIC16.84■□□□□ 0.29
GRIK1P39086 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.84■□□□□ 0.29
GRIK1P39086 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GRIK1P39086 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GRIK1P39086 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.84■□□□□ 0.29
GRIK1P39086 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.83■□□□□ 0.29
GRIK1P39086 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
GRIK1P39086 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
GRIK1P39086 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.83■□□□□ 0.29
GRIK1P39086 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GRIK1P39086 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
GRIK1P39086 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GRIK1P39086 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.83■□□□□ 0.28
GRIK1P39086 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.83■□□□□ 0.28
GRIK1P39086 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 AC027307.3-201ENST00000594262 1100 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 REXO1L1P-202ENST00000608646 1974 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 FLJ16779-201ENST00000612722 7638 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
GRIK1P39086 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 AF228730.6-201ENST00000641497 218 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 AC084121.3-201ENST00000641716 218 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 AC105233.6-201ENST00000642093 218 ntBASIC16.83■□□□□ 0.28
GRIK1P39086 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GRIK1P39086 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRIK1P39086 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 MTHFR-217ENST00000641820 1569 ntBASIC16.82■□□□□ 0.28
GRIK1P39086 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
GRIK1P39086 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GRIK1P39086 AL353779.1-201ENST00000434793 351 ntBASIC16.82■□□□□ 0.28
GRIK1P39086 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.82■□□□□ 0.28
GRIK1P39086 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.82■□□□□ 0.28
GRIK1P39086 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
GRIK1P39086 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 AC004790.1-201ENST00000612686 536 ntBASIC16.82■□□□□ 0.28
GRIK1P39086 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GRIK1P39086 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
GRIK1P39086 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIK1P39086 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIK1P39086 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIK1P39086 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIK1P39086 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms