Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.03■□□□□ 0.8
COL15A1P39059 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL15A1P39059 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 RPL13AP20-201ENST00000459725 609 ntBASIC20.03■□□□□ 0.8
COL15A1P39059 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.03■□□□□ 0.8
COL15A1P39059 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.03■□□□□ 0.8
COL15A1P39059 AC079316.1-201ENST00000548397 411 ntBASIC20.03■□□□□ 0.8
COL15A1P39059 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.03■□□□□ 0.8
COL15A1P39059 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.03■□□□□ 0.8
COL15A1P39059 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.03■□□□□ 0.8
COL15A1P39059 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.03■□□□□ 0.8
COL15A1P39059 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.03■□□□□ 0.8
COL15A1P39059 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.02■□□□□ 0.8
COL15A1P39059 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.02■□□□□ 0.8
COL15A1P39059 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL15A1P39059 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COL15A1P39059 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL15A1P39059 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
COL15A1P39059 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.02■□□□□ 0.8
COL15A1P39059 MIR1247-201ENST00000408206 136 ntBASIC20.02■□□□□ 0.8
COL15A1P39059 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 AC022137.2-201ENST00000503482 481 ntBASIC20.02■□□□□ 0.8
COL15A1P39059 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.02■□□□□ 0.8
COL15A1P39059 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.02■□□□□ 0.8
COL15A1P39059 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 DUX4L45-201ENST00000566406 1057 ntBASIC20.02■□□□□ 0.8
COL15A1P39059 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL15A1P39059 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.02■□□□□ 0.8
COL15A1P39059 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL15A1P39059 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.02■□□□□ 0.79
COL15A1P39059 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL15A1P39059 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 AL607033.1-201ENST00000623900 1599 ntBASIC20.01■□□□□ 0.79
COL15A1P39059 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 PFN1P12-201ENST00000455938 534 ntBASIC20.01■□□□□ 0.79
COL15A1P39059 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.01■□□□□ 0.79
COL15A1P39059 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.01■□□□□ 0.79
COL15A1P39059 AC068587.10-201ENST00000641210 219 ntBASIC20.01■□□□□ 0.79
COL15A1P39059 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL15A1P39059 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.01■□□□□ 0.79
COL15A1P39059 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.01■□□□□ 0.79
COL15A1P39059 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL15A1P39059 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20■□□□□ 0.79
COL15A1P39059 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL15A1P39059 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms