Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT9P35527 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT9P35527 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT9P35527 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 AC002056.1-201ENST00000395613 760 ntBASIC17.54■□□□□ 0.4
KRT9P35527 AL022342.1-201ENST00000400363 863 ntBASIC17.54■□□□□ 0.4
KRT9P35527 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 AL161645.1-201ENST00000622716 1255 ntBASIC17.54■□□□□ 0.4
KRT9P35527 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT9P35527 AC067930.6-201ENST00000623257 4947 ntBASIC17.54■□□□□ 0.4
KRT9P35527 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 AC099063.4-201ENST00000641099 1602 ntBASIC17.54■□□□□ 0.4
KRT9P35527 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT9P35527 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT9P35527 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT9P35527 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT9P35527 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 AC105250.1-201ENST00000509378 2057 ntBASIC17.53■□□□□ 0.4
KRT9P35527 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KRT9P35527 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT9P35527 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT9P35527 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT9P35527 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT9P35527 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
KRT9P35527 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT9P35527 AP002472.1-201ENST00000577490 586 ntBASIC17.53■□□□□ 0.4
KRT9P35527 AL078644.1-201ENST00000609881 752 ntBASIC17.53■□□□□ 0.4
KRT9P35527 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms