Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.11■□□□□ 0.17
LSP1P33241 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.11■□□□□ 0.17
LSP1P33241 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.11■□□□□ 0.17
LSP1P33241 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 AC091607.1-201ENST00000490318 1060 ntBASIC16.11■□□□□ 0.17
LSP1P33241 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 HYMAI.1-201ENST00000620949 238 ntBASIC16.11■□□□□ 0.17
LSP1P33241 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LSP1P33241 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 REXO1L1P-202ENST00000608646 1974 ntBASIC16.11■□□□□ 0.17
LSP1P33241 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
LSP1P33241 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 AC073508.3-201ENST00000619697 1419 ntBASIC16.11■□□□□ 0.17
LSP1P33241 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LSP1P33241 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LSP1P33241 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LSP1P33241 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.1■□□□□ 0.17
LSP1P33241 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 MYO15B-237ENST00000642007 4893 ntBASIC16.1■□□□□ 0.17
LSP1P33241 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 RNF152P1-201ENST00000397754 604 ntBASIC16.1■□□□□ 0.17
LSP1P33241 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.1■□□□□ 0.17
LSP1P33241 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.1■□□□□ 0.17
LSP1P33241 KRT18P38-201ENST00000449496 1282 ntBASIC16.1■□□□□ 0.17
LSP1P33241 HOMER2P1-201ENST00000455653 964 ntBASIC16.1■□□□□ 0.17
LSP1P33241 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 AC087641.1-201ENST00000557561 1021 ntBASIC16.1■□□□□ 0.17
LSP1P33241 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.1■□□□□ 0.17
LSP1P33241 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.1■□□□□ 0.17
LSP1P33241 AC090616.6-201ENST00000582640 721 ntBASIC16.1■□□□□ 0.17
LSP1P33241 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 AC139887.4-201ENST00000607877 719 ntBASIC16.1■□□□□ 0.17
LSP1P33241 IGHV3-41-201ENST00000613121 348 ntBASIC16.1■□□□□ 0.17
LSP1P33241 AC073592.4-201ENST00000623827 446 ntBASIC16.1■□□□□ 0.17
LSP1P33241 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 CICP20-201ENST00000443330 2801 ntBASIC16.1■□□□□ 0.17
LSP1P33241 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
LSP1P33241 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSP1P33241 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LSP1P33241 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSP1P33241 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.09■□□□□ 0.17
LSP1P33241 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LSP1P33241 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSP1P33241 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
LSP1P33241 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSP1P33241 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LSP1P33241 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSP1P33241 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSP1P33241 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSP1P33241 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms