Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 AP005117.1-202ENST00000581724 1908 ntBASIC14.72□□□□□ -0.05
SHC1P29353 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.72□□□□□ -0.05
SHC1P29353 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 RBPMS2P1-201ENST00000437762 623 ntBASIC14.72□□□□□ -0.05
SHC1P29353 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 AC109322.1-201ENST00000524499 1264 ntBASIC14.72□□□□□ -0.05
SHC1P29353 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 SPTSSB-204ENST00000617024 1292 ntBASIC14.72□□□□□ -0.05
SHC1P29353 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SHC1P29353 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 PRAL-201ENST00000624952 3286 ntBASIC14.72□□□□□ -0.05
SHC1P29353 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 AC013268.4-201ENST00000637413 2228 ntBASIC14.72□□□□□ -0.05
SHC1P29353 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHC1P29353 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHC1P29353 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 TSEN15P1-201ENST00000423257 515 ntBASIC14.71□□□□□ -0.05
SHC1P29353 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.71□□□□□ -0.05
SHC1P29353 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.71□□□□□ -0.05
SHC1P29353 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.71□□□□□ -0.05
SHC1P29353 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.71□□□□□ -0.05
SHC1P29353 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHC1P29353 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHC1P29353 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SHC1P29353 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 AC022532.1-201ENST00000624563 1728 ntBASIC14.7□□□□□ -0.06
SHC1P29353 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 AP3S2-216ENST00000617003 1561 ntBASIC14.7□□□□□ -0.06
SHC1P29353 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.7□□□□□ -0.06
SHC1P29353 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.7□□□□□ -0.06
SHC1P29353 SPDYE14P-201ENST00000442619 822 ntBASIC14.7□□□□□ -0.06
SHC1P29353 AC098859.1-201ENST00000502915 1238 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms