Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 PKD1P5-201ENST00000532415 10291 ntBASIC15.81■□□□□ 0.12
VARSP26640 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.81■□□□□ 0.12
VARSP26640 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.81■□□□□ 0.12
VARSP26640 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.81■□□□□ 0.12
VARSP26640 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 RARRES2P8-201ENST00000566335 367 ntBASIC15.81■□□□□ 0.12
VARSP26640 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 AL138918.1-201ENST00000568306 659 ntBASIC15.81■□□□□ 0.12
VARSP26640 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.81■□□□□ 0.12
VARSP26640 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARSP26640 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VARSP26640 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.81■□□□□ 0.12
VARSP26640 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.8■□□□□ 0.12
VARSP26640 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VARSP26640 AL592424.1-201ENST00000563624 1536 ntBASIC15.8■□□□□ 0.12
VARSP26640 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.8■□□□□ 0.12
VARSP26640 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
VARSP26640 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 AL355306.1-201ENST00000415580 579 ntBASIC15.8■□□□□ 0.12
VARSP26640 AL671277.1-201ENST00000429656 993 ntBASIC15.8■□□□□ 0.12
VARSP26640 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.8■□□□□ 0.12
VARSP26640 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 COX20P2-201ENST00000452636 358 ntBASIC15.8■□□□□ 0.12
VARSP26640 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
VARSP26640 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.8■□□□□ 0.12
VARSP26640 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VARSP26640 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
VARSP26640 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.8■□□□□ 0.12
VARSP26640 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.8■□□□□ 0.12
VARSP26640 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.8■□□□□ 0.12
VARSP26640 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARSP26640 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
VARSP26640 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms