Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CDC14C-201ENST00000428251 1719 ntBASIC16.19■□□□□ 0.18
CCND1P24385 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 SNX33P1-201ENST00000592116 1762 ntBASIC16.18■□□□□ 0.18
CCND1P24385 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
CCND1P24385 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCND1P24385 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 PMS2P4-201ENST00000412466 1052 ntBASIC16.18■□□□□ 0.18
CCND1P24385 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.18■□□□□ 0.18
CCND1P24385 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.18■□□□□ 0.18
CCND1P24385 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 AL137784.3-201ENST00000623858 2288 ntBASIC16.18■□□□□ 0.18
CCND1P24385 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.18■□□□□ 0.18
CCND1P24385 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.18■□□□□ 0.18
CCND1P24385 LINC02447-202ENST00000501888 2146 ntBASIC16.18■□□□□ 0.18
CCND1P24385 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCND1P24385 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.18■□□□□ 0.18
CCND1P24385 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.18■□□□□ 0.18
CCND1P24385 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCND1P24385 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 MED15P5-201ENST00000423150 992 ntBASIC16.17■□□□□ 0.18
CCND1P24385 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.17■□□□□ 0.18
CCND1P24385 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.17■□□□□ 0.18
CCND1P24385 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 AC021097.1-201ENST00000607902 574 ntBASIC16.17■□□□□ 0.18
CCND1P24385 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 AC016027.1-202ENST00000607927 1699 ntBASIC16.17■□□□□ 0.18
CCND1P24385 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCND1P24385 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCND1P24385 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCND1P24385 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms