Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL1P22362 AC126365.1-201ENST00000578585 1514 ntBASIC13.75□□□□□ -0.21
CCL1P22362 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 NFIC-211ENST00000641145 8399 ntBASIC13.75□□□□□ -0.21
CCL1P22362 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 MKNK2P1-201ENST00000437526 628 ntBASIC13.75□□□□□ -0.21
CCL1P22362 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 HNRNPUP1-201ENST00000554987 333 ntBASIC13.75□□□□□ -0.21
CCL1P22362 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL1P22362 AC097359.3-201ENST00000603982 1210 ntBASIC13.75□□□□□ -0.21
CCL1P22362 C20orf181-201ENST00000623918 480 ntBASIC13.75□□□□□ -0.21
CCL1P22362 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CCL1P22362 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL1P22362 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 AP3S2-216ENST00000617003 1561 ntBASIC13.75□□□□□ -0.21
CCL1P22362 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
CCL1P22362 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCL1P22362 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 AC004832.2-201ENST00000426397 482 ntBASIC13.74□□□□□ -0.21
CCL1P22362 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL1P22362 AC069335.1-201ENST00000489972 472 ntBASIC13.74□□□□□ -0.21
CCL1P22362 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 PGAM5P1-201ENST00000518923 814 ntBASIC13.74□□□□□ -0.21
CCL1P22362 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL1P22362 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 AL121894.2-201ENST00000602977 491 ntBASIC13.74□□□□□ -0.21
CCL1P22362 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL1P22362 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL1P22362 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL1P22362 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL1P22362 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL1P22362 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.74□□□□□ -0.21
CCL1P22362 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
CCL1P22362 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.73□□□□□ -0.21
CCL1P22362 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL1P22362 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL1P22362 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL1P22362 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms