Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC141586.5-201ENST00000624546 2050 ntBASIC19.29■□□□□ 0.68
KCNA3P22001 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.29■□□□□ 0.68
KCNA3P22001 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KCNA3P22001 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KCNA3P22001 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.29■□□□□ 0.68
KCNA3P22001 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.29■□□□□ 0.68
KCNA3P22001 EEF1DP6-201ENST00000449232 372 ntBASIC19.29■□□□□ 0.68
KCNA3P22001 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.29■□□□□ 0.68
KCNA3P22001 RN7SL555P-201ENST00000584742 339 ntBASIC19.29■□□□□ 0.68
KCNA3P22001 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KCNA3P22001 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.29■□□□□ 0.68
KCNA3P22001 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.29■□□□□ 0.68
KCNA3P22001 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.29■□□□□ 0.68
KCNA3P22001 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KCNA3P22001 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNA3P22001 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.29■□□□□ 0.68
KCNA3P22001 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
KCNA3P22001 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 ACTBP8-201ENST00000403258 1108 ntBASIC19.28■□□□□ 0.68
KCNA3P22001 AC069218.1-201ENST00000435269 762 ntBASIC19.28■□□□□ 0.68
KCNA3P22001 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.28■□□□□ 0.68
KCNA3P22001 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.28■□□□□ 0.68
KCNA3P22001 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.28■□□□□ 0.68
KCNA3P22001 RN7SL48P-201ENST00000579283 293 ntBASIC19.28■□□□□ 0.68
KCNA3P22001 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.28■□□□□ 0.68
KCNA3P22001 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KCNA3P22001 AF254983.2-201ENST00000612331 135 ntBASIC19.28■□□□□ 0.68
KCNA3P22001 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNA3P22001 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.28■□□□□ 0.68
KCNA3P22001 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.28■□□□□ 0.68
KCNA3P22001 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA3P22001 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KCNA3P22001 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 AL354989.2-201ENST00000435838 1540 ntBASIC19.27■□□□□ 0.68
KCNA3P22001 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
KCNA3P22001 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.27■□□□□ 0.68
KCNA3P22001 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.27■□□□□ 0.68
KCNA3P22001 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.27■□□□□ 0.68
KCNA3P22001 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.27■□□□□ 0.68
KCNA3P22001 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
KCNA3P22001 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.27■□□□□ 0.68
KCNA3P22001 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.27■□□□□ 0.68
KCNA3P22001 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
KCNA3P22001 AL645939.5-201ENST00000606834 243 ntBASIC19.27■□□□□ 0.68
KCNA3P22001 AC244157.2-201ENST00000616239 1006 ntBASIC19.27■□□□□ 0.68
KCNA3P22001 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KCNA3P22001 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA3P22001 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA3P22001 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
KCNA3P22001 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNA3P22001 AC006480.2-201ENST00000609770 1337 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms