Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.28■□□□□ 0.2
NFKB1P19838 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 AC092850.2-201ENST00000623821 2697 ntBASIC16.28■□□□□ 0.2
NFKB1P19838 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NFKB1P19838 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
NFKB1P19838 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.27■□□□□ 0.2
NFKB1P19838 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 DNAJB3-202ENST00000449667 1266 ntBASIC16.27■□□□□ 0.2
NFKB1P19838 SNHG9-202ENST00000564014 471 ntBASIC16.27■□□□□ 0.2
NFKB1P19838 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.27■□□□□ 0.2
NFKB1P19838 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFKB1P19838 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.27■□□□□ 0.2
NFKB1P19838 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.27■□□□□ 0.19
NFKB1P19838 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NFKB1P19838 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NFKB1P19838 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 KRT8P37-201ENST00000451609 1420 ntBASIC16.27■□□□□ 0.19
NFKB1P19838 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NFKB1P19838 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NFKB1P19838 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.26■□□□□ 0.19
NFKB1P19838 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NFKB1P19838 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
NFKB1P19838 MIR1233-2-201ENST00000408138 82 ntBASIC16.26■□□□□ 0.19
NFKB1P19838 MIR1233-1-201ENST00000408722 82 ntBASIC16.26■□□□□ 0.19
NFKB1P19838 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.26■□□□□ 0.19
NFKB1P19838 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.26■□□□□ 0.19
NFKB1P19838 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
NFKB1P19838 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.26■□□□□ 0.19
NFKB1P19838 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.26■□□□□ 0.19
NFKB1P19838 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.26■□□□□ 0.19
NFKB1P19838 MIR6080-201ENST00000617359 66 ntBASIC16.26■□□□□ 0.19
NFKB1P19838 AC023511.2-201ENST00000618803 211 ntBASIC16.26■□□□□ 0.19
NFKB1P19838 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.26■□□□□ 0.19
NFKB1P19838 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.26■□□□□ 0.19
NFKB1P19838 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.26■□□□□ 0.19
NFKB1P19838 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NFKB1P19838 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NFKB1P19838 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFKB1P19838 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NFKB1P19838 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NFKB1P19838 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.25■□□□□ 0.19
NFKB1P19838 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.25■□□□□ 0.19
NFKB1P19838 EEF1DP4-201ENST00000446006 880 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms