Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.16■□□□□ 0.18
VCLP18206 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VCLP18206 MIR346-201ENST00000362234 95 ntBASIC16.16■□□□□ 0.18
VCLP18206 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.16■□□□□ 0.18
VCLP18206 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VCLP18206 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.16■□□□□ 0.18
VCLP18206 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.16■□□□□ 0.18
VCLP18206 LINC00628-201ENST00000628516 1289 ntBASIC16.16■□□□□ 0.18
VCLP18206 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 AC006058.4-201ENST00000624016 1670 ntBASIC16.15■□□□□ 0.18
VCLP18206 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 RBPMS2P1-201ENST00000437762 623 ntBASIC16.15■□□□□ 0.18
VCLP18206 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 SLC25A39P2-201ENST00000537614 270 ntBASIC16.15■□□□□ 0.18
VCLP18206 AC093520.2-201ENST00000561830 333 ntBASIC16.15■□□□□ 0.18
VCLP18206 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.15■□□□□ 0.18
VCLP18206 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 AL138918.1-201ENST00000568306 659 ntBASIC16.15■□□□□ 0.18
VCLP18206 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.15■□□□□ 0.18
VCLP18206 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
VCLP18206 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.15■□□□□ 0.18
VCLP18206 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.15■□□□□ 0.18
VCLP18206 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCLP18206 AL596087.1-201ENST00000400979 1969 ntBASIC16.15■□□□□ 0.18
VCLP18206 AC073347.1-201ENST00000421633 2643 ntBASIC16.15■□□□□ 0.18
VCLP18206 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
VCLP18206 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VCLP18206 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.14■□□□□ 0.18
VCLP18206 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
VCLP18206 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VCLP18206 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.14■□□□□ 0.17
VCLP18206 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VCLP18206 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VCLP18206 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.14■□□□□ 0.17
VCLP18206 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms