Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 DNAJB3-202ENST00000449667 1266 ntBASIC15.65■□□□□ 0.1
CDH1P12830 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH1P12830 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH1P12830 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH1P12830 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CDH1P12830 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH1P12830 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH1P12830 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH1P12830 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH1P12830 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH1P12830 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH1P12830 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CDH1P12830 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH1P12830 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH1P12830 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH1P12830 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 FAM220BP-201ENST00000377689 816 ntBASIC15.64■□□□□ 0.09
CDH1P12830 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 CDC14C-201ENST00000428251 1719 ntBASIC15.64■□□□□ 0.09
CDH1P12830 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 AC061975.2-201ENST00000581722 295 ntBASIC15.64■□□□□ 0.09
CDH1P12830 AC024267.1-201ENST00000582320 895 ntBASIC15.64■□□□□ 0.09
CDH1P12830 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH1P12830 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH1P12830 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH1P12830 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH1P12830 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH1P12830 LINC02447-202ENST00000501888 2146 ntBASIC15.64■□□□□ 0.09
CDH1P12830 AC112504.1-201ENST00000623415 1841 ntBASIC15.64■□□□□ 0.09
CDH1P12830 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH1P12830 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH1P12830 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 AP3S2-216ENST00000617003 1561 ntBASIC15.63■□□□□ 0.09
CDH1P12830 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
CDH1P12830 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDH1P12830 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.63■□□□□ 0.09
CDH1P12830 AC023141.5-201ENST00000458585 616 ntBASIC15.63■□□□□ 0.09
CDH1P12830 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH1P12830 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH1P12830 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDH1P12830 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH1P12830 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms