Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MS4A1P11836 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 HTR5BP-201ENST00000430851 1154 ntBASIC20.57■□□□□ 0.88
MS4A1P11836 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A1P11836 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A1P11836 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A1P11836 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.57■□□□□ 0.88
MS4A1P11836 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 TMBIM7P-203ENST00000641617 1718 ntBASIC20.57■□□□□ 0.88
MS4A1P11836 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A1P11836 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A1P11836 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MS4A1P11836 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.56■□□□□ 0.88
MS4A1P11836 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MS4A1P11836 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.56■□□□□ 0.88
MS4A1P11836 AL691432.1-201ENST00000596308 1422 ntBASIC20.56■□□□□ 0.88
MS4A1P11836 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 HLA-H-201ENST00000383620 1096 ntBASIC20.56■□□□□ 0.88
MS4A1P11836 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.56■□□□□ 0.88
MS4A1P11836 KRT8P48-201ENST00000515599 1220 ntBASIC20.56■□□□□ 0.88
MS4A1P11836 RNA5SP410-201ENST00000516285 106 ntBASIC20.56■□□□□ 0.88
MS4A1P11836 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.56■□□□□ 0.88
MS4A1P11836 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.56■□□□□ 0.88
MS4A1P11836 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.56■□□□□ 0.88
MS4A1P11836 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.56■□□□□ 0.88
MS4A1P11836 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.56■□□□□ 0.88
MS4A1P11836 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A1P11836 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 DNAJB3-201ENST00000446806 729 ntBASIC20.55■□□□□ 0.88
MS4A1P11836 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.55■□□□□ 0.88
MS4A1P11836 AL109954.1-202ENST00000564051 2148 ntBASIC20.55■□□□□ 0.88
MS4A1P11836 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
MS4A1P11836 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MS4A1P11836 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.55■□□□□ 0.88
MS4A1P11836 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 AC136621.1-201ENST00000624017 2304 ntBASIC20.55■□□□□ 0.88
MS4A1P11836 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MS4A1P11836 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A1P11836 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms