Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PARP1P09874 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 SPTLC1P1-201ENST00000447199 261 ntBASIC18.53■□□□□ 0.56
PARP1P09874 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 AC104794.3-201ENST00000566840 1248 ntBASIC18.53■□□□□ 0.56
PARP1P09874 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.53■□□□□ 0.56
PARP1P09874 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
PARP1P09874 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.53■□□□□ 0.56
PARP1P09874 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.53■□□□□ 0.56
PARP1P09874 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.53■□□□□ 0.56
PARP1P09874 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.53■□□□□ 0.56
PARP1P09874 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARP1P09874 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 Z97205.2-201ENST00000564697 1639 ntBASIC18.52■□□□□ 0.56
PARP1P09874 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.52■□□□□ 0.56
PARP1P09874 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.52■□□□□ 0.56
PARP1P09874 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.52■□□□□ 0.56
PARP1P09874 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PARP1P09874 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.52■□□□□ 0.56
PARP1P09874 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.52■□□□□ 0.56
PARP1P09874 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.52■□□□□ 0.56
PARP1P09874 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.52■□□□□ 0.56
PARP1P09874 SPDYE18-201ENST00000510091 1050 ntBASIC18.52■□□□□ 0.56
PARP1P09874 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.52■□□□□ 0.56
PARP1P09874 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.52■□□□□ 0.56
PARP1P09874 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
PARP1P09874 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.52■□□□□ 0.56
PARP1P09874 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.52■□□□□ 0.56
PARP1P09874 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 CICP6-201ENST00000457191 2729 ntBASIC18.52■□□□□ 0.56
PARP1P09874 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PARP1P09874 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PARP1P09874 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PARP1P09874 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.52■□□□□ 0.55
PARP1P09874 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PARP1P09874 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
PARP1P09874 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PARP1P09874 AC018892.3-201ENST00000623986 2499 ntBASIC18.51■□□□□ 0.55
PARP1P09874 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PARP1P09874 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 AC046158.3-201ENST00000624947 2558 ntBASIC18.51■□□□□ 0.55
PARP1P09874 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 AC024909.3-201ENST00000611513 2257 ntBASIC18.51■□□□□ 0.55
PARP1P09874 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PARP1P09874 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PARP1P09874 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PARP1P09874 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.51■□□□□ 0.55
PARP1P09874 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.51■□□□□ 0.55
PARP1P09874 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.51■□□□□ 0.55
PARP1P09874 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.51■□□□□ 0.55
PARP1P09874 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms