Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP2P08253 SERBP1P3-201ENST00000459980 809 ntBASIC16.04■□□□□ 0.16
MMP2P08253 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
MMP2P08253 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP2P08253 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP2P08253 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP2P08253 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.04■□□□□ 0.16
MMP2P08253 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 Z97205.2-201ENST00000564697 1639 ntBASIC16.04■□□□□ 0.16
MMP2P08253 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MMP2P08253 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP2P08253 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MMP2P08253 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 AC105250.1-201ENST00000509378 2057 ntBASIC16.03■□□□□ 0.16
MMP2P08253 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP2P08253 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.03■□□□□ 0.16
MMP2P08253 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 AC005498.2-205ENST00000593218 784 ntBASIC16.03■□□□□ 0.16
MMP2P08253 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP2P08253 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP2P08253 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP2P08253 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MMP2P08253 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP2P08253 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 AC020658.6-201ENST00000623564 1870 ntBASIC16.02■□□□□ 0.16
MMP2P08253 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP2P08253 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP2P08253 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP2P08253 AC009477.1-201ENST00000452936 217 ntBASIC16.02■□□□□ 0.16
MMP2P08253 CYMP-203ENST00000474680 1263 ntBASIC16.02■□□□□ 0.16
MMP2P08253 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP2P08253 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP2P08253 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MMP2P08253 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP2P08253 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP2P08253 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms