Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM3P06753 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 ELK2BP-201ENST00000415014 1224 ntBASIC18.01■□□□□ 0.47
TPM3P06753 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM3P06753 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TPM3P06753 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM3P06753 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 AP003680.1-201ENST00000598970 3660 ntBASIC18.01■□□□□ 0.47
TPM3P06753 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM3P06753 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM3P06753 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TPM3P06753 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18■□□□□ 0.47
TPM3P06753 AC006504.4-201ENST00000592118 1568 ntBASIC18■□□□□ 0.47
TPM3P06753 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 AC090616.6-203ENST00000579186 1945 ntBASIC18■□□□□ 0.47
TPM3P06753 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TPM3P06753 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TPM3P06753 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18■□□□□ 0.47
TPM3P06753 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18■□□□□ 0.47
TPM3P06753 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TPM3P06753 LAGE3P1-201ENST00000425356 484 ntBASIC18■□□□□ 0.47
TPM3P06753 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18■□□□□ 0.47
TPM3P06753 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18■□□□□ 0.47
TPM3P06753 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18■□□□□ 0.47
TPM3P06753 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18■□□□□ 0.47
TPM3P06753 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18■□□□□ 0.47
TPM3P06753 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TPM3P06753 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18■□□□□ 0.47
TPM3P06753 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 AC105250.1-201ENST00000509378 2057 ntBASIC18■□□□□ 0.47
TPM3P06753 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM3P06753 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18■□□□□ 0.47
TPM3P06753 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 AC012569.1-201ENST00000591191 1524 ntBASIC17.99■□□□□ 0.47
TPM3P06753 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
TPM3P06753 AC021097.1-201ENST00000607902 574 ntBASIC17.99■□□□□ 0.47
TPM3P06753 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TPM3P06753 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms