Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AL365330.1-201ENST00000607459 531 ntBASIC14.44□□□□□ -0.1
HLA-DQA2P01906 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQA2P01906 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 PMS2P7-201ENST00000506558 1336 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AC073439.1-201ENST00000624121 1774 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 KRT19P2-202ENST00000557173 1012 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AL161645.1-201ENST00000622716 1255 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AC138969.2-201ENST00000532739 9932 ntBASIC14.43□□□□□ -0.1
HLA-DQA2P01906 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQA2P01906 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 RPL13AP23-201ENST00000480739 586 ntBASIC14.42□□□□□ -0.1
HLA-DQA2P01906 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.42□□□□□ -0.1
HLA-DQA2P01906 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms