Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.27□□□□□ -0.12
CNOT4O95628 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CNOT4O95628 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CNOT4O95628 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CNOT4O95628 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CNOT4O95628 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT4O95628 AL161772.1-201ENST00000610494 4412 ntBASIC14.27□□□□□ -0.12
CNOT4O95628 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CNOT4O95628 FO538757.1-201ENST00000623083 1397 ntBASIC14.27□□□□□ -0.12
CNOT4O95628 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.27□□□□□ -0.12
CNOT4O95628 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNOT4O95628 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT4O95628 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT4O95628 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CNOT4O95628 FAM207CP-201ENST00000443486 507 ntBASIC14.27□□□□□ -0.13
CNOT4O95628 AL512638.1-201ENST00000457493 794 ntBASIC14.27□□□□□ -0.13
CNOT4O95628 AC097493.3-201ENST00000509725 367 ntBASIC14.27□□□□□ -0.13
CNOT4O95628 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT4O95628 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.27□□□□□ -0.13
CNOT4O95628 AL390754.1-201ENST00000619088 582 ntBASIC14.27□□□□□ -0.13
CNOT4O95628 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT4O95628 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNOT4O95628 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT4O95628 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT4O95628 PCDH8P1-201ENST00000428983 2773 ntBASIC14.27□□□□□ -0.13
CNOT4O95628 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT4O95628 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CNOT4O95628 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CNOT4O95628 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
CNOT4O95628 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT4O95628 SPDYE17-201ENST00000412399 783 ntBASIC14.26□□□□□ -0.13
CNOT4O95628 AC241585.1-201ENST00000433527 519 ntBASIC14.26□□□□□ -0.13
CNOT4O95628 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT4O95628 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT4O95628 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT4O95628 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 LINC02560-201ENST00000596379 459 ntBASIC14.26□□□□□ -0.13
CNOT4O95628 AL133215.2-201ENST00000609242 977 ntBASIC14.26□□□□□ -0.13
CNOT4O95628 AC008761.3-201ENST00000624803 892 ntBASIC14.26□□□□□ -0.13
CNOT4O95628 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
CNOT4O95628 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT4O95628 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT4O95628 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT4O95628 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 598.8 ms