Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VAPBO95292 AC073347.1-201ENST00000421633 2643 ntBASIC16.11■□□□□ 0.17
VAPBO95292 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 UXT-AS1-201ENST00000590504 1525 ntBASIC16.11■□□□□ 0.17
VAPBO95292 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 FAM220BP-201ENST00000377689 816 ntBASIC16.11■□□□□ 0.17
VAPBO95292 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.11■□□□□ 0.17
VAPBO95292 KRT8P23-201ENST00000560090 1207 ntBASIC16.11■□□□□ 0.17
VAPBO95292 AC243562.2-201ENST00000561247 970 ntBASIC16.11■□□□□ 0.17
VAPBO95292 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
VAPBO95292 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.11■□□□□ 0.17
VAPBO95292 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.11■□□□□ 0.17
VAPBO95292 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.11■□□□□ 0.17
VAPBO95292 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.11■□□□□ 0.17
VAPBO95292 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VAPBO95292 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VAPBO95292 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 BNIP3P1-202ENST00000550043 1585 ntBASIC16.1■□□□□ 0.17
VAPBO95292 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 AL592309.1-201ENST00000443127 649 ntBASIC16.1■□□□□ 0.17
VAPBO95292 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.1■□□□□ 0.17
VAPBO95292 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VAPBO95292 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.1■□□□□ 0.17
VAPBO95292 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VAPBO95292 ELL2P1-201ENST00000413990 1906 ntBASIC16.09■□□□□ 0.17
VAPBO95292 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
VAPBO95292 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VAPBO95292 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
VAPBO95292 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
VAPBO95292 AC018892.3-201ENST00000623986 2499 ntBASIC16.09■□□□□ 0.17
VAPBO95292 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.09■□□□□ 0.17
VAPBO95292 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.09■□□□□ 0.17
VAPBO95292 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.09■□□□□ 0.17
VAPBO95292 HLA-H-201ENST00000383620 1096 ntBASIC16.09■□□□□ 0.17
VAPBO95292 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VAPBO95292 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.09■□□□□ 0.17
VAPBO95292 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.09■□□□□ 0.17
VAPBO95292 CEND1P1-201ENST00000451006 455 ntBASIC16.09■□□□□ 0.17
VAPBO95292 AC069335.1-201ENST00000489972 472 ntBASIC16.09■□□□□ 0.17
VAPBO95292 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
VAPBO95292 SLC25A39P2-201ENST00000537614 270 ntBASIC16.09■□□□□ 0.17
VAPBO95292 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms