Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.43■□□□□ 0.06
CPNE3O75131 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 PIN1P1-201ENST00000412108 996 ntBASIC15.43■□□□□ 0.06
CPNE3O75131 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 AL080243.2-201ENST00000418783 582 ntBASIC15.43■□□□□ 0.06
CPNE3O75131 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.43■□□□□ 0.06
CPNE3O75131 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.43■□□□□ 0.06
CPNE3O75131 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.43■□□□□ 0.06
CPNE3O75131 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CPNE3O75131 AC061975.2-201ENST00000581722 295 ntBASIC15.43■□□□□ 0.06
CPNE3O75131 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CPNE3O75131 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 AC079328.2-201ENST00000561241 3354 ntBASIC15.42■□□□□ 0.06
CPNE3O75131 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 CRB3P1-201ENST00000449338 276 ntBASIC15.42■□□□□ 0.06
CPNE3O75131 SERBP1P3-201ENST00000459980 809 ntBASIC15.42■□□□□ 0.06
CPNE3O75131 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.42■□□□□ 0.06
CPNE3O75131 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 AL844908.2-201ENST00000609461 460 ntBASIC15.42■□□□□ 0.06
CPNE3O75131 AC012645.4-201ENST00000610691 1061 ntBASIC15.42■□□□□ 0.06
CPNE3O75131 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.42■□□□□ 0.06
CPNE3O75131 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.42■□□□□ 0.06
CPNE3O75131 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE3O75131 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE3O75131 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms