Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 C18orf15-201ENST00000623680 2534 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SSSCA1O60232 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 AL359258.3-201ENST00000622910 2331 ntBASIC13.11□□□□□ -0.31
SSSCA1O60232 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSSCA1O60232 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 AP002383.4-201ENST00000442518 975 ntBASIC13.11□□□□□ -0.31
SSSCA1O60232 DUX4L26-201ENST00000489078 1255 ntBASIC13.11□□□□□ -0.31
SSSCA1O60232 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 AL121956.5-201ENST00000625261 221 ntBASIC13.11□□□□□ -0.31
SSSCA1O60232 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.11□□□□□ -0.31
SSSCA1O60232 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSSCA1O60232 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.11□□□□□ -0.31
SSSCA1O60232 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SSSCA1O60232 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 AC112693.3-201ENST00000624819 1983 ntBASIC13.11□□□□□ -0.31
SSSCA1O60232 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSSCA1O60232 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SSSCA1O60232 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.1□□□□□ -0.31
SSSCA1O60232 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.1□□□□□ -0.31
SSSCA1O60232 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.1□□□□□ -0.31
SSSCA1O60232 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.1□□□□□ -0.31
SSSCA1O60232 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.1□□□□□ -0.31
SSSCA1O60232 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms