Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL109954.1-202ENST00000564051 2148 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 AC087481.3-201ENST00000602886 1894 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 AC006486.2-201ENST00000624246 2199 ntBASIC17.94■□□□□ 0.46
ACTN4O43707 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.94■□□□□ 0.46
ACTN4O43707 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.94■□□□□ 0.46
ACTN4O43707 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.94■□□□□ 0.46
ACTN4O43707 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.94■□□□□ 0.46
ACTN4O43707 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.94■□□□□ 0.46
ACTN4O43707 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.94■□□□□ 0.46
ACTN4O43707 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ACTN4O43707 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ACTN4O43707 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.94■□□□□ 0.46
ACTN4O43707 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACTN4O43707 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.94■□□□□ 0.46
ACTN4O43707 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.93■□□□□ 0.46
ACTN4O43707 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 SERPINA7P1-201ENST00000443077 631 ntBASIC17.93■□□□□ 0.46
ACTN4O43707 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.93■□□□□ 0.46
ACTN4O43707 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.93■□□□□ 0.46
ACTN4O43707 IGHV3-62-201ENST00000520057 340 ntBASIC17.93■□□□□ 0.46
ACTN4O43707 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.93■□□□□ 0.46
ACTN4O43707 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.93■□□□□ 0.46
ACTN4O43707 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.93■□□□□ 0.46
ACTN4O43707 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ACTN4O43707 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC023157.3-201ENST00000619086 2088 ntBASIC17.93■□□□□ 0.46
ACTN4O43707 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ACTN4O43707 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACTN4O43707 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.93■□□□□ 0.46
ACTN4O43707 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ACTN4O43707 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.92■□□□□ 0.46
ACTN4O43707 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ACTN4O43707 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
ACTN4O43707 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.92■□□□□ 0.46
ACTN4O43707 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms