Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11□□□□□ -0.65
NDUFA1O15239 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11□□□□□ -0.65
NDUFA1O15239 PTCHD3P3-201ENST00000403073 906 ntBASIC11□□□□□ -0.65
NDUFA1O15239 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11□□□□□ -0.65
NDUFA1O15239 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 HCG4-201ENST00000418983 998 ntBASIC11□□□□□ -0.65
NDUFA1O15239 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11□□□□□ -0.65
NDUFA1O15239 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11□□□□□ -0.65
NDUFA1O15239 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11□□□□□ -0.65
NDUFA1O15239 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 AC087641.1-201ENST00000557561 1021 ntBASIC11□□□□□ -0.65
NDUFA1O15239 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11□□□□□ -0.65
NDUFA1O15239 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11□□□□□ -0.65
NDUFA1O15239 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 AC005412.3-201ENST00000580309 715 ntBASIC11□□□□□ -0.65
NDUFA1O15239 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11□□□□□ -0.65
NDUFA1O15239 AL445228.2-201ENST00000605589 952 ntBASIC11□□□□□ -0.65
NDUFA1O15239 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
NDUFA1O15239 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11□□□□□ -0.65
NDUFA1O15239 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NDUFA1O15239 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 LINC00528-201ENST00000600723 2160 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms