Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CKBP1-201ENST00000565489 1086 ntBASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MIR3180-5-201ENST00000583743 153 ntBASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PC-208ENST00000529047 1607 ntTSL 3 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC152010.1-201ENST00000415779 2006 ntBASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC011298.2-201ENST00000617989 482 ntBASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KRT8P44-201ENST00000441609 1350 ntBASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC011477.6-201ENST00000604980 1927 ntBASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms