Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 LINC02560-201ENST00000596379 459 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 LINC01115-203ENST00000606068 577 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 AC104794.3-201ENST00000566840 1248 ntBASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 AC008761.3-201ENST00000624803 892 ntBASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YJEFN3A6XGL0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 FAM207CP-201ENST00000443486 507 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SPTLC1P1-201ENST00000447199 261 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AL589987.1-201ENST00000453380 819 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms